Cluster: HRGMv2_3145_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3145
- CGC Family ID: CGCFAM_00172
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3145_42 | HRGMv2_3145_42_3 | 2246 | 2959 | - | GT51 |
| NULL(UNKNOWN) | HRGMv2_3145_42 | HRGMv2_3145_42_4 | 3107 | 3241 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3145_42 | HRGMv2_3145_42_5 | 3446 | 3919 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3145_42 | HRGMv2_3145_42_6 | 3923 | 5962 | - | 3.A.1.134.4 |
| TC | HRGMv2_3145_42 | HRGMv2_3145_42_7 | 5959 | 6723 | - | 3.A.1.134.2 |
Gene ID: HRGMv2_3145_42_3
Type: CAZyme
Location: 2246 - 2959 (-)
Type: CAZyme
Location: 2246 - 2959 (-)
Gene ID: HRGMv2_3145_42_4
Type:
Location: 3107 - 3241 (-)
Type:
Location: 3107 - 3241 (-)
Gene ID: HRGMv2_3145_42_5
Type:
Location: 3446 - 3919 (-)
Type:
Location: 3446 - 3919 (-)
Gene ID: HRGMv2_3145_42_6
Type: TC
Location: 3923 - 5962 (-)
Type: TC
Location: 3923 - 5962 (-)
Gene ID: HRGMv2_3145_42_7
Type: TC
Location: 5959 - 6723 (-)
Type: TC
Location: 5959 - 6723 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Timburyella
Species
Timburyella sp900554165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.