Cluster: HRGMv2_3145_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3145
- CGC Family ID: CGCFAM_00237
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3145_5 | HRGMv2_3145_5_3 | 2266 | 3711 | + | 3.D.10.1.4 |
| pfam | HRGMv2_3145_5 | HRGMv2_3145_5_4 | 3902 | 4744 | + | QRPTase_C | QRPTase_N |
| CAZyme | HRGMv2_3145_5 | HRGMv2_3145_5_5 | 5182 | 12501 | + | GH94 | GT84 |
Gene ID: HRGMv2_3145_5_3
Type: TC
Location: 2266 - 3711 (+)
Type: TC
Location: 2266 - 3711 (+)
Gene ID: HRGMv2_3145_5_4
Type: pfam
Location: 3902 - 4744 (+)
Type: pfam
Location: 3902 - 4744 (+)
Gene ID: HRGMv2_3145_5_5
Type: CAZyme
Location: 5182 - 12501 (+)
Type: CAZyme
Location: 5182 - 12501 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Timburyella
Species
Timburyella sp900554165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.