Cluster: HRGMv2_3143_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3143
- CGC Family ID: CGCFAM_10310
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3143_67 | HRGMv2_3143_67_6 | 3783 | 4538 | + | 3.A.1.17.13 |
| TC | HRGMv2_3143_67 | HRGMv2_3143_67_7 | 4531 | 5346 | + | 3.A.1.17.3 |
| pfam | HRGMv2_3143_67 | HRGMv2_3143_67_8 | 5343 | 6335 | + | NMT1 | Phosphonate-bd | NMT1_2 |
| CAZyme | HRGMv2_3143_67 | HRGMv2_3143_67_9 | 6584 | 8344 | + | GH73 |
Gene ID: HRGMv2_3143_67_6
Type: TC
Location: 3783 - 4538 (+)
Type: TC
Location: 3783 - 4538 (+)
Gene ID: HRGMv2_3143_67_7
Type: TC
Location: 4531 - 5346 (+)
Type: TC
Location: 4531 - 5346 (+)
Gene ID: HRGMv2_3143_67_8
Type: pfam
Location: 5343 - 6335 (+)
Type: pfam
Location: 5343 - 6335 (+)
Gene ID: HRGMv2_3143_67_9
Type: CAZyme
Location: 6584 - 8344 (+)
Type: CAZyme
Location: 6584 - 8344 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900550615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.