Cluster: HRGMv2_3143_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3143
- CGC Family ID: CGCFAM_02044
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3143_42 | HRGMv2_3143_42_10 | 9105 | 11747 | + | GT51 |
| NULL(UNKNOWN) | HRGMv2_3143_42 | HRGMv2_3143_42_11 | 12088 | 12273 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3143_42 | HRGMv2_3143_42_12 | 12399 | 12977 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3143_42 | HRGMv2_3143_42_13 | 13141 | 13710 | + | 2.A.107.1.2 |
Gene ID: HRGMv2_3143_42_10
Type: CAZyme
Location: 9105 - 11747 (+)
Type: CAZyme
Location: 9105 - 11747 (+)
Gene ID: HRGMv2_3143_42_11
Type:
Location: 12088 - 12273 (+)
Type:
Location: 12088 - 12273 (+)
Gene ID: HRGMv2_3143_42_12
Type:
Location: 12399 - 12977 (-)
Type:
Location: 12399 - 12977 (-)
Gene ID: HRGMv2_3143_42_13
Type: TC
Location: 13141 - 13710 (+)
Type: TC
Location: 13141 - 13710 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900550615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.