Cluster: HRGMv2_3143_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3143
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3143_32 | HRGMv2_3143_32_9 | 7776 | 9602 | - | GH13_39 |
| peptidase | HRGMv2_3143_32 | HRGMv2_3143_32_10 | 9614 | 11641 | - | X52.001 |
| NULL(UNKNOWN) | HRGMv2_3143_32 | HRGMv2_3143_32_11 | 11677 | 12183 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3143_32 | HRGMv2_3143_32_12 | 12194 | 13027 | - | 9.B.157.1.2 |
Gene ID: HRGMv2_3143_32_9
Type: CAZyme
Location: 7776 - 9602 (-)
Type: CAZyme
Location: 7776 - 9602 (-)
Gene ID: HRGMv2_3143_32_10
Type: peptidase
Location: 9614 - 11641 (-)
Type: peptidase
Location: 9614 - 11641 (-)
Gene ID: HRGMv2_3143_32_11
Type:
Location: 11677 - 12183 (-)
Type:
Location: 11677 - 12183 (-)
Gene ID: HRGMv2_3143_32_12
Type: TC
Location: 12194 - 13027 (-)
Type: TC
Location: 12194 - 13027 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900550615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3143_32_12 | vegetarian > omnivore | 1.96275 | 0.01057 |