Cluster: HRGMv2_3142_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3142
- CGC Family ID: CGCFAM_03884
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3142_4 | HRGMv2_3142_4_20 | 21503 | 21697 | - | 9.B.70.1.1 |
| pfam | HRGMv2_3142_4 | HRGMv2_3142_4_21 | 21700 | 22212 | - | Spore_III_AB |
| TC | HRGMv2_3142_4 | HRGMv2_3142_4_22 | 22209 | 23036 | - | 9.B.70.1.1 |
| TC | HRGMv2_3142_4 | HRGMv2_3142_4_23 | 23468 | 25210 | - | 3.A.1.135.5 |
| TC | HRGMv2_3142_4 | HRGMv2_3142_4_24 | 25203 | 26927 | - | 3.A.1.135.5 |
| CAZyme | HRGMv2_3142_4 | HRGMv2_3142_4_25 | 27338 | 30421 | + | GH38 |
Gene ID: HRGMv2_3142_4_20
Type: TC
Location: 21503 - 21697 (-)
Type: TC
Location: 21503 - 21697 (-)
Gene ID: HRGMv2_3142_4_21
Type: pfam
Location: 21700 - 22212 (-)
Type: pfam
Location: 21700 - 22212 (-)
Gene ID: HRGMv2_3142_4_22
Type: TC
Location: 22209 - 23036 (-)
Type: TC
Location: 22209 - 23036 (-)
Gene ID: HRGMv2_3142_4_23
Type: TC
Location: 23468 - 25210 (-)
Type: TC
Location: 23468 - 25210 (-)
Gene ID: HRGMv2_3142_4_24
Type: TC
Location: 25203 - 26927 (-)
Type: TC
Location: 25203 - 26927 (-)
Gene ID: HRGMv2_3142_4_25
Type: CAZyme
Location: 27338 - 30421 (+)
Type: CAZyme
Location: 27338 - 30421 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900762935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.