Cluster: HRGMv2_3142_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_3142
- CGC Family ID: CGCFAM_02297
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3142_4 | HRGMv2_3142_4_8 | 6830 | 9004 | - | GH65 |
| CAZyme | HRGMv2_3142_4 | HRGMv2_3142_4_9 | 9004 | 11280 | - | GH65 |
| TF | HRGMv2_3142_4 | HRGMv2_3142_4_10 | 11406 | 12422 | - | LacI |
| NULL(UNKNOWN) | HRGMv2_3142_4 | HRGMv2_3142_4_11 | 12610 | 13188 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3142_4 | HRGMv2_3142_4_12 | 13210 | 14610 | + | 2.A.50.2.1 |
Gene ID: HRGMv2_3142_4_8
Type: CAZyme
Location: 6830 - 9004 (-)
Type: CAZyme
Location: 6830 - 9004 (-)
Gene ID: HRGMv2_3142_4_9
Type: CAZyme
Location: 9004 - 11280 (-)
Type: CAZyme
Location: 9004 - 11280 (-)
Gene ID: HRGMv2_3142_4_10
Type: TF
Location: 11406 - 12422 (-)
Type: TF
Location: 11406 - 12422 (-)
Gene ID: HRGMv2_3142_4_11
Type:
Location: 12610 - 13188 (+)
Type:
Location: 12610 - 13188 (+)
Gene ID: HRGMv2_3142_4_12
Type: TC
Location: 13210 - 14610 (+)
Type: TC
Location: 13210 - 14610 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900762935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.