Cluster: HRGMv2_3142_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3142
- CGC Family ID: CGCFAM_05719
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3142_3 | HRGMv2_3142_3_49 | 57686 | 59050 | + | GH28 |
| TC | HRGMv2_3142_3 | HRGMv2_3142_3_50 | 59114 | 59917 | - | 3.A.1.34.1 |
| TC | HRGMv2_3142_3 | HRGMv2_3142_3_51 | 59910 | 60803 | - | 3.A.1.34.1 |
| pfam | HRGMv2_3142_3 | HRGMv2_3142_3_52 | 60822 | 61793 | - | ABC_sub_bind |
| CAZyme | HRGMv2_3142_3 | HRGMv2_3142_3_53 | 62281 | 63984 | + | GH2 |
Gene ID: HRGMv2_3142_3_49
Type: CAZyme
Location: 57686 - 59050 (+)
Type: CAZyme
Location: 57686 - 59050 (+)
Gene ID: HRGMv2_3142_3_50
Type: TC
Location: 59114 - 59917 (-)
Type: TC
Location: 59114 - 59917 (-)
Gene ID: HRGMv2_3142_3_51
Type: TC
Location: 59910 - 60803 (-)
Type: TC
Location: 59910 - 60803 (-)
Gene ID: HRGMv2_3142_3_52
Type: pfam
Location: 60822 - 61793 (-)
Type: pfam
Location: 60822 - 61793 (-)
Gene ID: HRGMv2_3142_3_53
Type: CAZyme
Location: 62281 - 63984 (+)
Type: CAZyme
Location: 62281 - 63984 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900762935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3142_3_52 | vegetarian > vegan | 1.08747 | 0.00012 |