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Cluster: HRGMv2_3142_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3142_3 HRGMv2_3142_3_12 14785 15585 - 3.D.6.1.1
TC HRGMv2_3142_3 HRGMv2_3142_3_13 15599 16192 - 3.D.6.1.2
TC HRGMv2_3142_3 HRGMv2_3142_3_14 16189 16860 - 3.D.6.1.2
pfam HRGMv2_3142_3 HRGMv2_3142_3_15 16857 17405 - FMN_bind
TC HRGMv2_3142_3 HRGMv2_3142_3_16 17402 18307 - 3.D.6.1.2
TC HRGMv2_3142_3 HRGMv2_3142_3_17 18304 19665 - 3.D.6.1.2
CAZyme HRGMv2_3142_3 HRGMv2_3142_3_18 19952 21247 + GH180
pfam HRGMv2_3142_3 HRGMv2_3142_3_19 21314 22741 - tRNA-synt_2b | HGTP_anticodon
pfam HRGMv2_3142_3 HRGMv2_3142_3_20 22821 23654 - Acyltransferase
TC HRGMv2_3142_3 HRGMv2_3142_3_21 23828 25549 + 4.C.1.1.4
Gene ID: HRGMv2_3142_3_12
Type: TC
Location: 14785 - 15585 (-)
Gene ID: HRGMv2_3142_3_13
Type: TC
Location: 15599 - 16192 (-)
Gene ID: HRGMv2_3142_3_14
Type: TC
Location: 16189 - 16860 (-)
Gene ID: HRGMv2_3142_3_15
Type: pfam
Location: 16857 - 17405 (-)
Gene ID: HRGMv2_3142_3_16
Type: TC
Location: 17402 - 18307 (-)
Gene ID: HRGMv2_3142_3_17
Type: TC
Location: 18304 - 19665 (-)
Gene ID: HRGMv2_3142_3_18
Type: CAZyme
Location: 19952 - 21247 (+)
Gene ID: HRGMv2_3142_3_19
Type: pfam
Location: 21314 - 22741 (-)
Gene ID: HRGMv2_3142_3_20
Type: pfam
Location: 22821 - 23654 (-)
Gene ID: HRGMv2_3142_3_21
Type: TC
Location: 23828 - 25549 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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