Cluster: HRGMv2_3142_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3142
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3142_1 | HRGMv2_3142_1_61 | 69271 | 70155 | - | 3.A.1.1.20 |
| TC | HRGMv2_3142_1 | HRGMv2_3142_1_62 | 70174 | 71109 | - | 3.A.1.1.20 |
| pfam | HRGMv2_3142_1 | HRGMv2_3142_1_63 | 71288 | 72781 | - | SBP_bac_1 |
| TC | HRGMv2_3142_1 | HRGMv2_3142_1_64 | 73108 | 74925 | - | 3.A.1.106.2 |
| CAZyme | HRGMv2_3142_1 | HRGMv2_3142_1_65 | 74960 | 77140 | - | GH36 |
Gene ID: HRGMv2_3142_1_61
Type: TC
Location: 69271 - 70155 (-)
Type: TC
Location: 69271 - 70155 (-)
Gene ID: HRGMv2_3142_1_62
Type: TC
Location: 70174 - 71109 (-)
Type: TC
Location: 70174 - 71109 (-)
Gene ID: HRGMv2_3142_1_63
Type: pfam
Location: 71288 - 72781 (-)
Type: pfam
Location: 71288 - 72781 (-)
Gene ID: HRGMv2_3142_1_64
Type: TC
Location: 73108 - 74925 (-)
Type: TC
Location: 73108 - 74925 (-)
Gene ID: HRGMv2_3142_1_65
Type: CAZyme
Location: 74960 - 77140 (-)
Type: CAZyme
Location: 74960 - 77140 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900762935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.