Cluster: HRGMv2_3142_CGC29
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3142
- CGC Family ID: CGCFAM_00810
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3142_36 | HRGMv2_3142_36_2 | 1565 | 2506 | + | GT2 |
| pfam | HRGMv2_3142_36 | HRGMv2_3142_36_3 | 2503 | 2997 | - | Acetyltransf_1 | FR47 | Acetyltransf_3 | Acetyltransf_7 | Acetyltransf_10 |
| TC | HRGMv2_3142_36 | HRGMv2_3142_36_4 | 3057 | 3446 | - | 3.A.5.1.1 |
Gene ID: HRGMv2_3142_36_2
Type: CAZyme
Location: 1565 - 2506 (+)
Type: CAZyme
Location: 1565 - 2506 (+)
Gene ID: HRGMv2_3142_36_3
Type: pfam
Location: 2503 - 2997 (-)
Type: pfam
Location: 2503 - 2997 (-)
Gene ID: HRGMv2_3142_36_4
Type: TC
Location: 3057 - 3446 (-)
Type: TC
Location: 3057 - 3446 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900762935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3142_36_2 | vegetarian > omnivore | 1.19543 | 0.04233 |