Cluster: HRGMv2_3142_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3142
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3142_31 | HRGMv2_3142_31_5 | 2300 | 3208 | + | GH43_24 |
| TF | HRGMv2_3142_31 | HRGMv2_3142_31_6 | 3319 | 4398 | + | MarR |
| pfam | HRGMv2_3142_31 | HRGMv2_3142_31_7 | 4426 | 5346 | + | Indigoidine_A |
| TC | HRGMv2_3142_31 | HRGMv2_3142_31_8 | 5775 | 6644 | + | 3.A.1.3.20 |
| TC | HRGMv2_3142_31 | HRGMv2_3142_31_9 | 6661 | 7422 | + | 3.A.1.3.20 |
| TC | HRGMv2_3142_31 | HRGMv2_3142_31_10 | 7425 | 8162 | + | 3.A.1.3.20 |
Gene ID: HRGMv2_3142_31_5
Type: CAZyme
Location: 2300 - 3208 (+)
Type: CAZyme
Location: 2300 - 3208 (+)
Gene ID: HRGMv2_3142_31_6
Type: TF
Location: 3319 - 4398 (+)
Type: TF
Location: 3319 - 4398 (+)
Gene ID: HRGMv2_3142_31_7
Type: pfam
Location: 4426 - 5346 (+)
Type: pfam
Location: 4426 - 5346 (+)
Gene ID: HRGMv2_3142_31_8
Type: TC
Location: 5775 - 6644 (+)
Type: TC
Location: 5775 - 6644 (+)
Gene ID: HRGMv2_3142_31_9
Type: TC
Location: 6661 - 7422 (+)
Type: TC
Location: 6661 - 7422 (+)
Gene ID: HRGMv2_3142_31_10
Type: TC
Location: 7425 - 8162 (+)
Type: TC
Location: 7425 - 8162 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900762935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.