Cluster: HRGMv2_3142_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3142
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3142_26 | HRGMv2_3142_26_23 | 17120 | 17998 | + | 3.A.1.15.8 |
| TC | HRGMv2_3142_26 | HRGMv2_3142_26_24 | 17995 | 18753 | + | 3.A.1.15.5 |
| TC | HRGMv2_3142_26 | HRGMv2_3142_26_25 | 18750 | 19589 | + | 3.A.1.15.5 |
| pfam | HRGMv2_3142_26 | HRGMv2_3142_26_26 | 19589 | 20275 | + | TrmO_N | TrmO_C |
| CAZyme | HRGMv2_3142_26 | HRGMv2_3142_26_27 | 20324 | 23086 | - | GH2 |
Gene ID: HRGMv2_3142_26_23
Type: TC
Location: 17120 - 17998 (+)
Type: TC
Location: 17120 - 17998 (+)
Gene ID: HRGMv2_3142_26_24
Type: TC
Location: 17995 - 18753 (+)
Type: TC
Location: 17995 - 18753 (+)
Gene ID: HRGMv2_3142_26_25
Type: TC
Location: 18750 - 19589 (+)
Type: TC
Location: 18750 - 19589 (+)
Gene ID: HRGMv2_3142_26_26
Type: pfam
Location: 19589 - 20275 (+)
Type: pfam
Location: 19589 - 20275 (+)
Gene ID: HRGMv2_3142_26_27
Type: CAZyme
Location: 20324 - 23086 (-)
Type: CAZyme
Location: 20324 - 23086 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900762935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.