Cluster: HRGMv2_3142_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3142
- CGC Family ID: CGCFAM_05385
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3142_20 | HRGMv2_3142_20_7 | 4715 | 6976 | - | CBM67 | GH78 |
| TF | HRGMv2_3142_20 | HRGMv2_3142_20_8 | 7057 | 7869 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_3142_20 | HRGMv2_3142_20_9 | 8002 | 9318 | + | GH4 |
| CAZyme | HRGMv2_3142_20 | HRGMv2_3142_20_10 | 9382 | 11493 | - | GH92 |
| TC | HRGMv2_3142_20 | HRGMv2_3142_20_11 | 11514 | 12212 | - | 9.B.28.1.2 |
Gene ID: HRGMv2_3142_20_7
Type: CAZyme
Location: 4715 - 6976 (-)
Type: CAZyme
Location: 4715 - 6976 (-)
Gene ID: HRGMv2_3142_20_8
Type: TF
Location: 7057 - 7869 (-)
Type: TF
Location: 7057 - 7869 (-)
Gene ID: HRGMv2_3142_20_9
Type: CAZyme
Location: 8002 - 9318 (+)
Type: CAZyme
Location: 8002 - 9318 (+)
Gene ID: HRGMv2_3142_20_10
Type: CAZyme
Location: 9382 - 11493 (-)
Type: CAZyme
Location: 9382 - 11493 (-)
Gene ID: HRGMv2_3142_20_11
Type: TC
Location: 11514 - 12212 (-)
Type: TC
Location: 11514 - 12212 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900762935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.