Cluster: HRGMv2_3142_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3142
- CGC Family ID: CGCFAM_01969
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3142_14 | HRGMv2_3142_14_9 | 7418 | 7996 | + | 9.B.156.3.1 |
| TC | HRGMv2_3142_14 | HRGMv2_3142_14_10 | 7984 | 8502 | + | 9.B.156.3.1 |
| TC | HRGMv2_3142_14 | HRGMv2_3142_14_11 | 8543 | 9925 | - | 2.A.66.1.28 |
| CAZyme | HRGMv2_3142_14 | HRGMv2_3142_14_12 | 9950 | 11080 | - | CE9 |
| pfam | HRGMv2_3142_14 | HRGMv2_3142_14_13 | 11142 | 12221 | - | APH |
| TC | HRGMv2_3142_14 | HRGMv2_3142_14_14 | 12429 | 13868 | - | 2.A.40.7.6 |
Gene ID: HRGMv2_3142_14_9
Type: TC
Location: 7418 - 7996 (+)
Type: TC
Location: 7418 - 7996 (+)
Gene ID: HRGMv2_3142_14_10
Type: TC
Location: 7984 - 8502 (+)
Type: TC
Location: 7984 - 8502 (+)
Gene ID: HRGMv2_3142_14_11
Type: TC
Location: 8543 - 9925 (-)
Type: TC
Location: 8543 - 9925 (-)
Gene ID: HRGMv2_3142_14_12
Type: CAZyme
Location: 9950 - 11080 (-)
Type: CAZyme
Location: 9950 - 11080 (-)
Gene ID: HRGMv2_3142_14_13
Type: pfam
Location: 11142 - 12221 (-)
Type: pfam
Location: 11142 - 12221 (-)
Gene ID: HRGMv2_3142_14_14
Type: TC
Location: 12429 - 13868 (-)
Type: TC
Location: 12429 - 13868 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900762935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.