Cluster: HRGMv2_3142_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3142
- CGC Family ID: CGCFAM_04578
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3142_1 | HRGMv2_3142_1_20 | 17461 | 19326 | - | GH13_39 |
| CAZyme | HRGMv2_3142_1 | HRGMv2_3142_1_21 | 19411 | 20856 | - | GT5 |
| pfam | HRGMv2_3142_1 | HRGMv2_3142_1_22 | 20853 | 21971 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_3142_1 | HRGMv2_3142_1_23 | 21984 | 23174 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_3142_1 | HRGMv2_3142_1_24 | 23188 | 25098 | - | GH13_9 |
| pfam | HRGMv2_3142_1 | HRGMv2_3142_1_25 | 25183 | 25764 | - | Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4 | Acetyltransf_7 |
| TC | HRGMv2_3142_1 | HRGMv2_3142_1_26 | 26163 | 27539 | + | 1.A.26.1.2 |
Gene ID: HRGMv2_3142_1_20
Type: CAZyme
Location: 17461 - 19326 (-)
Type: CAZyme
Location: 17461 - 19326 (-)
Gene ID: HRGMv2_3142_1_21
Type: CAZyme
Location: 19411 - 20856 (-)
Type: CAZyme
Location: 19411 - 20856 (-)
Gene ID: HRGMv2_3142_1_22
Type: pfam
Location: 20853 - 21971 (-)
Type: pfam
Location: 20853 - 21971 (-)
Gene ID: HRGMv2_3142_1_23
Type: pfam
Location: 21984 - 23174 (-)
Type: pfam
Location: 21984 - 23174 (-)
Gene ID: HRGMv2_3142_1_24
Type: CAZyme
Location: 23188 - 25098 (-)
Type: CAZyme
Location: 23188 - 25098 (-)
Gene ID: HRGMv2_3142_1_25
Type: pfam
Location: 25183 - 25764 (-)
Type: pfam
Location: 25183 - 25764 (-)
Gene ID: HRGMv2_3142_1_26
Type: TC
Location: 26163 - 27539 (+)
Type: TC
Location: 26163 - 27539 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900762935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.