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Cluster: HRGMv2_3142_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3142_9 HRGMv2_3142_9_19 19750 20772 + 3.A.7.13.2
NULL(UNKNOWN) HRGMv2_3142_9 HRGMv2_3142_9_20 20877 21428 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3142_9 HRGMv2_3142_9_21 21416 22183 - CE1
NULL(UNKNOWN) HRGMv2_3142_9 HRGMv2_3142_9_22 22198 23829 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3142_9 HRGMv2_3142_9_23 23841 25448 - GH110
STP HRGMv2_3142_9 HRGMv2_3142_9_24 25709 28966 + TPR_2
STP HRGMv2_3142_9 HRGMv2_3142_9_25 29092 29943 + PfkB
TC HRGMv2_3142_9 HRGMv2_3142_9_26 29958 31301 - 2.A.26.1.3
Gene ID: HRGMv2_3142_9_19
Type: TC
Location: 19750 - 20772 (+)
Gene ID: HRGMv2_3142_9_20
Type:
Location: 20877 - 21428 (+)
Gene ID: HRGMv2_3142_9_21
Type: CAZyme
Location: 21416 - 22183 (-)
Gene ID: HRGMv2_3142_9_22
Type:
Location: 22198 - 23829 (-)
Gene ID: HRGMv2_3142_9_23
Type: CAZyme
Location: 23841 - 25448 (-)
Gene ID: HRGMv2_3142_9_24
Type: STP
Location: 25709 - 28966 (+)
Gene ID: HRGMv2_3142_9_25
Type: STP
Location: 29092 - 29943 (+)
Gene ID: HRGMv2_3142_9_26
Type: TC
Location: 29958 - 31301 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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