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Cluster: HRGMv2_3142_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3142_7 HRGMv2_3142_7_49 49144 50469 + GH4
sulfatase HRGMv2_3142_7 HRGMv2_3142_7_50 50640 51359 + S4
CAZyme HRGMv2_3142_7 HRGMv2_3142_7_51 51373 53118 + GH36
sulfatase HRGMv2_3142_7 HRGMv2_3142_7_52 53426 53731 - S1_7
CAZyme HRGMv2_3142_7 HRGMv2_3142_7_53 53817 56189 - GH2
TF HRGMv2_3142_7 HRGMv2_3142_7_54 56607 57194 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_3142_7 HRGMv2_3142_7_55 57210 59675 + GH38
TF HRGMv2_3142_7 HRGMv2_3142_7_56 59875 60270 + MarR
TC HRGMv2_3142_7 HRGMv2_3142_7_57 60275 62038 + 3.A.1.135.5
TC HRGMv2_3142_7 HRGMv2_3142_7_58 62020 63918 + 3.A.1.135.5
TC HRGMv2_3142_7 HRGMv2_3142_7_59 64126 65043 + 3.A.1.105.9
Gene ID: HRGMv2_3142_7_49
Type: CAZyme
Location: 49144 - 50469 (+)
Gene ID: HRGMv2_3142_7_50
Type: sulfatase
Location: 50640 - 51359 (+)
Gene ID: HRGMv2_3142_7_51
Type: CAZyme
Location: 51373 - 53118 (+)
Gene ID: HRGMv2_3142_7_52
Type: sulfatase
Location: 53426 - 53731 (-)
Gene ID: HRGMv2_3142_7_53
Type: CAZyme
Location: 53817 - 56189 (-)
Gene ID: HRGMv2_3142_7_54
Type: TF
Location: 56607 - 57194 (+)
Gene ID: HRGMv2_3142_7_55
Type: CAZyme
Location: 57210 - 59675 (+)
Gene ID: HRGMv2_3142_7_56
Type: TF
Location: 59875 - 60270 (+)
Gene ID: HRGMv2_3142_7_57
Type: TC
Location: 60275 - 62038 (+)
Gene ID: HRGMv2_3142_7_58
Type: TC
Location: 62020 - 63918 (+)
Gene ID: HRGMv2_3142_7_59
Type: TC
Location: 64126 - 65043 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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