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Cluster: HRGMv2_3142_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3142_6 HRGMv2_3142_6_32 28724 29485 - 3.A.1.11.8
pfam HRGMv2_3142_6 HRGMv2_3142_6_33 29757 30584 + SpoU_methylase
CAZyme HRGMv2_3142_6 HRGMv2_3142_6_34 30732 32036 + GH28
TC HRGMv2_3142_6 HRGMv2_3142_6_35 32092 32928 - 3.A.1.132.3
TC HRGMv2_3142_6 HRGMv2_3142_6_36 32950 34827 - 3.A.1.120.6
pfam HRGMv2_3142_6 HRGMv2_3142_6_37 34846 35433 - DUF4093
pfam HRGMv2_3142_6 HRGMv2_3142_6_38 35426 36475 - DNA_pol3_delta | DNA_pol3_delta_C
TC HRGMv2_3142_6 HRGMv2_3142_6_39 36480 38723 - 3.A.11.1.3
pfam HRGMv2_3142_6 HRGMv2_3142_6_40 38778 41417 - tRNA-synt_2c | DHHA1 | tRNA_SAD
NULL(UNKNOWN) HRGMv2_3142_6 HRGMv2_3142_6_41 41678 42763 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3142_6 HRGMv2_3142_6_42 42862 44514 - GH123
Gene ID: HRGMv2_3142_6_32
Type: TC
Location: 28724 - 29485 (-)
Gene ID: HRGMv2_3142_6_33
Type: pfam
Location: 29757 - 30584 (+)
Gene ID: HRGMv2_3142_6_34
Type: CAZyme
Location: 30732 - 32036 (+)
Gene ID: HRGMv2_3142_6_35
Type: TC
Location: 32092 - 32928 (-)
Gene ID: HRGMv2_3142_6_36
Type: TC
Location: 32950 - 34827 (-)
Gene ID: HRGMv2_3142_6_37
Type: pfam
Location: 34846 - 35433 (-)
Gene ID: HRGMv2_3142_6_38
Type: pfam
Location: 35426 - 36475 (-)
Gene ID: HRGMv2_3142_6_39
Type: TC
Location: 36480 - 38723 (-)
Gene ID: HRGMv2_3142_6_40
Type: pfam
Location: 38778 - 41417 (-)
Gene ID: HRGMv2_3142_6_41
Type:
Location: 41678 - 42763 (-)
Gene ID: HRGMv2_3142_6_42
Type: CAZyme
Location: 42862 - 44514 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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