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Cluster: HRGMv2_3142_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3142_5 HRGMv2_3142_5_32 37335 39350 + CBM67 | GH78
pfam HRGMv2_3142_5 HRGMv2_3142_5_33 39372 40139 + AP_endonuc_2
CAZyme HRGMv2_3142_5 HRGMv2_3142_5_34 40150 41298 + CE15
pfam HRGMv2_3142_5 HRGMv2_3142_5_35 41311 42489 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
CAZyme HRGMv2_3142_5 HRGMv2_3142_5_36 42486 43238 + CE6
CAZyme HRGMv2_3142_5 HRGMv2_3142_5_37 43266 44441 + GH109
pfam HRGMv2_3142_5 HRGMv2_3142_5_38 44639 45532 + ROK
pfam HRGMv2_3142_5 HRGMv2_3142_5_39 45529 46464 + PMI_typeI_cat | MPI_cupin_dom
CAZyme HRGMv2_3142_5 HRGMv2_3142_5_40 46480 47985 + GH63
TC HRGMv2_3142_5 HRGMv2_3142_5_41 48148 50496 + 9.A.8.1.6
Gene ID: HRGMv2_3142_5_32
Type: CAZyme
Location: 37335 - 39350 (+)
Gene ID: HRGMv2_3142_5_33
Type: pfam
Location: 39372 - 40139 (+)
Gene ID: HRGMv2_3142_5_34
Type: CAZyme
Location: 40150 - 41298 (+)
Gene ID: HRGMv2_3142_5_35
Type: pfam
Location: 41311 - 42489 (+)
Gene ID: HRGMv2_3142_5_36
Type: CAZyme
Location: 42486 - 43238 (+)
Gene ID: HRGMv2_3142_5_37
Type: CAZyme
Location: 43266 - 44441 (+)
Gene ID: HRGMv2_3142_5_38
Type: pfam
Location: 44639 - 45532 (+)
Gene ID: HRGMv2_3142_5_39
Type: pfam
Location: 45529 - 46464 (+)
Gene ID: HRGMv2_3142_5_40
Type: CAZyme
Location: 46480 - 47985 (+)
Gene ID: HRGMv2_3142_5_41
Type: TC
Location: 48148 - 50496 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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