Cluster: HRGMv2_3142_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3142
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3142_4 | HRGMv2_3142_4_52 | 58138 | 59166 | + | GH172 |
| TF | HRGMv2_3142_4 | HRGMv2_3142_4_53 | 59502 | 59795 | + | HTH_5 |
| TF | HRGMv2_3142_4 | HRGMv2_3142_4_54 | 60142 | 60600 | + | MarR |
| TC | HRGMv2_3142_4 | HRGMv2_3142_4_55 | 60603 | 62348 | + | 3.A.1.117.2 |
| TC | HRGMv2_3142_4 | HRGMv2_3142_4_56 | 62335 | 63984 | + | 3.A.1.135.9 |
Gene ID: HRGMv2_3142_4_52
Type: CAZyme
Location: 58138 - 59166 (+)
Type: CAZyme
Location: 58138 - 59166 (+)
Gene ID: HRGMv2_3142_4_53
Type: TF
Location: 59502 - 59795 (+)
Type: TF
Location: 59502 - 59795 (+)
Gene ID: HRGMv2_3142_4_54
Type: TF
Location: 60142 - 60600 (+)
Type: TF
Location: 60142 - 60600 (+)
Gene ID: HRGMv2_3142_4_55
Type: TC
Location: 60603 - 62348 (+)
Type: TC
Location: 60603 - 62348 (+)
Gene ID: HRGMv2_3142_4_56
Type: TC
Location: 62335 - 63984 (+)
Type: TC
Location: 62335 - 63984 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900762935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.