Cluster: HRGMv2_3142_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3142
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3142_1 | HRGMv2_3142_1_8 | 8241 | 8897 | + | 3.A.1.3.17 |
| TC | HRGMv2_3142_1 | HRGMv2_3142_1_9 | 8909 | 9715 | + | 3.A.1.3.10 |
| TF | HRGMv2_3142_1 | HRGMv2_3142_1_10 | 9731 | 10003 | + | Trp_repressor |
| NULL(UNKNOWN) | HRGMv2_3142_1 | HRGMv2_3142_1_11 | 10119 | 10352 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3142_1 | HRGMv2_3142_1_12 | 10349 | 11449 | - | GH32 |
Gene ID: HRGMv2_3142_1_8
Type: TC
Location: 8241 - 8897 (+)
Type: TC
Location: 8241 - 8897 (+)
Gene ID: HRGMv2_3142_1_9
Type: TC
Location: 8909 - 9715 (+)
Type: TC
Location: 8909 - 9715 (+)
Gene ID: HRGMv2_3142_1_10
Type: TF
Location: 9731 - 10003 (+)
Type: TF
Location: 9731 - 10003 (+)
Gene ID: HRGMv2_3142_1_11
Type:
Location: 10119 - 10352 (-)
Type:
Location: 10119 - 10352 (-)
Gene ID: HRGMv2_3142_1_12
Type: CAZyme
Location: 10349 - 11449 (-)
Type: CAZyme
Location: 10349 - 11449 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900762935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.