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Cluster: HRGMv2_3134_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3134_2 HRGMv2_3134_2_321 322548 323564 + GT2
pfam HRGMv2_3134_2 HRGMv2_3134_2_322 323578 324684 + Amino_oxidase | GLF | NAD_binding_8
CAZyme HRGMv2_3134_2 HRGMv2_3134_2_323 324866 326878 + GH31_4
TF HRGMv2_3134_2 HRGMv2_3134_2_324 326978 327340 + HTH_5
STP HRGMv2_3134_2 HRGMv2_3134_2_325 327377 327595 + HMA
TC HRGMv2_3134_2 HRGMv2_3134_2_326 327654 329516 + 3.A.3.6.10
TC HRGMv2_3134_2 HRGMv2_3134_2_327 329624 330352 + 3.A.1.6.1
Gene ID: HRGMv2_3134_2_321
Type: CAZyme
Location: 322548 - 323564 (+)
Gene ID: HRGMv2_3134_2_322
Type: pfam
Location: 323578 - 324684 (+)
Gene ID: HRGMv2_3134_2_323
Type: CAZyme
Location: 324866 - 326878 (+)
Gene ID: HRGMv2_3134_2_324
Type: TF
Location: 326978 - 327340 (+)
Gene ID: HRGMv2_3134_2_325
Type: STP
Location: 327377 - 327595 (+)
Gene ID: HRGMv2_3134_2_326
Type: TC
Location: 327654 - 329516 (+)
Gene ID: HRGMv2_3134_2_327
Type: TC
Location: 329624 - 330352 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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