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Cluster: HRGMv2_3134_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3134_20 HRGMv2_3134_20_490 545978 546952 + 3.A.1.1.10
TC HRGMv2_3134_20 HRGMv2_3134_20_491 546966 547835 + 3.A.1.1.10
TC HRGMv2_3134_20 HRGMv2_3134_20_492 547913 549532 + 3.A.1.1.10
TF HRGMv2_3134_20 HRGMv2_3134_20_493 549767 552100 + HTH_AraC
peptidase HRGMv2_3134_20 HRGMv2_3134_20_494 552146 553291 + S12.UPW
CAZyme HRGMv2_3134_20 HRGMv2_3134_20_495 553327 555438 + GH51_1
CAZyme HRGMv2_3134_20 HRGMv2_3134_20_496 555525 556724 - GH10
Gene ID: HRGMv2_3134_20_490
Type: TC
Location: 545978 - 546952 (+)
Gene ID: HRGMv2_3134_20_491
Type: TC
Location: 546966 - 547835 (+)
Gene ID: HRGMv2_3134_20_492
Type: TC
Location: 547913 - 549532 (+)
Gene ID: HRGMv2_3134_20_493
Type: TF
Location: 549767 - 552100 (+)
Gene ID: HRGMv2_3134_20_494
Type: peptidase
Location: 552146 - 553291 (+)
Gene ID: HRGMv2_3134_20_495
Type: CAZyme
Location: 553327 - 555438 (+)
Gene ID: HRGMv2_3134_20_496
Type: CAZyme
Location: 555525 - 556724 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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