Cluster: HRGMv2_3134_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3134
- CGC Family ID: CGCFAM_01885
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3134_19 | HRGMv2_3134_19_217 | 242899 | 244221 | - | GH4 |
| TF | HRGMv2_3134_19 | HRGMv2_3134_19_218 | 244495 | 245310 | + | HTH_AraC | HTH_AraC |
| pfam | HRGMv2_3134_19 | HRGMv2_3134_19_219 | 245381 | 246214 | - | AP_endonuc_2 |
| CAZyme | HRGMv2_3134_19 | HRGMv2_3134_19_220 | 246333 | 247391 | - | GH179 |
| pfam | HRGMv2_3134_19 | HRGMv2_3134_19_221 | 247397 | 247852 | - | Glyoxalase_4 |
| TC | HRGMv2_3134_19 | HRGMv2_3134_19_222 | 247894 | 248823 | - | 3.A.1.1.9 |
| TC | HRGMv2_3134_19 | HRGMv2_3134_19_223 | 248823 | 249734 | - | 3.A.1.1.9 |
Gene ID: HRGMv2_3134_19_217
Type: CAZyme
Location: 242899 - 244221 (-)
Type: CAZyme
Location: 242899 - 244221 (-)
Gene ID: HRGMv2_3134_19_218
Type: TF
Location: 244495 - 245310 (+)
Type: TF
Location: 244495 - 245310 (+)
Gene ID: HRGMv2_3134_19_219
Type: pfam
Location: 245381 - 246214 (-)
Type: pfam
Location: 245381 - 246214 (-)
Gene ID: HRGMv2_3134_19_220
Type: CAZyme
Location: 246333 - 247391 (-)
Type: CAZyme
Location: 246333 - 247391 (-)
Gene ID: HRGMv2_3134_19_221
Type: pfam
Location: 247397 - 247852 (-)
Type: pfam
Location: 247397 - 247852 (-)
Gene ID: HRGMv2_3134_19_222
Type: TC
Location: 247894 - 248823 (-)
Type: TC
Location: 247894 - 248823 (-)
Gene ID: HRGMv2_3134_19_223
Type: TC
Location: 248823 - 249734 (-)
Type: TC
Location: 248823 - 249734 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Acutalibacter
Species
Acutalibacter sp019416455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.