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Cluster: HRGMv2_3134_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3134_14 HRGMv2_3134_14_123 115862 117601 + 3.A.1.135.7
TC HRGMv2_3134_14 HRGMv2_3134_14_124 117598 119349 + 3.A.1.135.5
pfam HRGMv2_3134_14 HRGMv2_3134_14_125 119400 119738 - MazG
NULL(UNKNOWN) HRGMv2_3134_14 HRGMv2_3134_14_126 119754 120008 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3134_14 HRGMv2_3134_14_127 120209 122839 + 3.A.3.2.21
STP HRGMv2_3134_14 HRGMv2_3134_14_128 123488 124927 + SBP_bac_1
TC HRGMv2_3134_14 HRGMv2_3134_14_129 125062 125973 + 3.A.1.1.18
TC HRGMv2_3134_14 HRGMv2_3134_14_130 125975 126838 + 3.A.1.1.41
CAZyme HRGMv2_3134_14 HRGMv2_3134_14_131 126943 129024 + GH3
Gene ID: HRGMv2_3134_14_123
Type: TC
Location: 115862 - 117601 (+)
Gene ID: HRGMv2_3134_14_124
Type: TC
Location: 117598 - 119349 (+)
Gene ID: HRGMv2_3134_14_125
Type: pfam
Location: 119400 - 119738 (-)
Gene ID: HRGMv2_3134_14_126
Type:
Location: 119754 - 120008 (-)
Gene ID: HRGMv2_3134_14_127
Type: TC
Location: 120209 - 122839 (+)
Gene ID: HRGMv2_3134_14_128
Type: STP
Location: 123488 - 124927 (+)
Gene ID: HRGMv2_3134_14_129
Type: TC
Location: 125062 - 125973 (+)
Gene ID: HRGMv2_3134_14_130
Type: TC
Location: 125975 - 126838 (+)
Gene ID: HRGMv2_3134_14_131
Type: CAZyme
Location: 126943 - 129024 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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