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Cluster: HRGMv2_3134_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3134_5 HRGMv2_3134_5_268 341761 343296 + GH13_18
CAZyme HRGMv2_3134_5 HRGMv2_3134_5_269 343354 345414 - GH42
pfam HRGMv2_3134_5 HRGMv2_3134_5_270 345639 346046 - ATP-synt_DE | ATP-synt_DE_N
TC HRGMv2_3134_5 HRGMv2_3134_5_271 346058 347449 - 3.A.2.1.5
TC HRGMv2_3134_5 HRGMv2_3134_5_272 347517 348407 - 3.A.2.1.5
TC HRGMv2_3134_5 HRGMv2_3134_5_273 348395 349915 - 3.A.2.1.5
pfam HRGMv2_3134_5 HRGMv2_3134_5_274 349919 350437 - OSCP
pfam HRGMv2_3134_5 HRGMv2_3134_5_275 350434 350928 - ATP-synt_B
TC HRGMv2_3134_5 HRGMv2_3134_5_276 350966 351178 - 3.A.2.1.5
TC HRGMv2_3134_5 HRGMv2_3134_5_277 351261 351947 - 3.A.2.1.5
Gene ID: HRGMv2_3134_5_268
Type: CAZyme
Location: 341761 - 343296 (+)
Gene ID: HRGMv2_3134_5_269
Type: CAZyme
Location: 343354 - 345414 (-)
Gene ID: HRGMv2_3134_5_270
Type: pfam
Location: 345639 - 346046 (-)
Gene ID: HRGMv2_3134_5_271
Type: TC
Location: 346058 - 347449 (-)
Gene ID: HRGMv2_3134_5_272
Type: TC
Location: 347517 - 348407 (-)
Gene ID: HRGMv2_3134_5_273
Type: TC
Location: 348395 - 349915 (-)
Gene ID: HRGMv2_3134_5_274
Type: pfam
Location: 349919 - 350437 (-)
Gene ID: HRGMv2_3134_5_275
Type: pfam
Location: 350434 - 350928 (-)
Gene ID: HRGMv2_3134_5_276
Type: TC
Location: 350966 - 351178 (-)
Gene ID: HRGMv2_3134_5_277
Type: TC
Location: 351261 - 351947 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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