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Cluster: HRGMv2_3134_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3134_5 HRGMv2_3134_5_72 96183 97388 + 2.A.36.2.1
pfam HRGMv2_3134_5 HRGMv2_3134_5_73 97467 98177 - MTS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
CAZyme HRGMv2_3134_5 HRGMv2_3134_5_74 98325 100187 - GH146
CAZyme HRGMv2_3134_5 HRGMv2_3134_5_75 100424 102649 + GH3
pfam HRGMv2_3134_5 HRGMv2_3134_5_76 102759 105536 + Trehalase | Glyco_hydro_63 | MGH1-like_GH
CAZyme HRGMv2_3134_5 HRGMv2_3134_5_77 105595 107403 - GH2
TF HRGMv2_3134_5 HRGMv2_3134_5_78 107553 107978 - MarR
CAZyme HRGMv2_3134_5 HRGMv2_3134_5_79 108016 109620 - GH51_1
TC HRGMv2_3134_5 HRGMv2_3134_5_80 109875 110993 + 3.A.1.1.38
TC HRGMv2_3134_5 HRGMv2_3134_5_81 111028 111918 + 3.A.1.1.23
TC HRGMv2_3134_5 HRGMv2_3134_5_82 111931 112803 + 3.A.1.1.20
STP HRGMv2_3134_5 HRGMv2_3134_5_83 112800 114419 + SBP_bac_1
NULL(UNKNOWN) HRGMv2_3134_5 HRGMv2_3134_5_84 114562 115416 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3134_5 HRGMv2_3134_5_85 115518 117017 - GH39
CAZyme HRGMv2_3134_5 HRGMv2_3134_5_86 117040 118188 - GH8
Gene ID: HRGMv2_3134_5_72
Type: TC
Location: 96183 - 97388 (+)
Gene ID: HRGMv2_3134_5_73
Type: pfam
Location: 97467 - 98177 (-)
Gene ID: HRGMv2_3134_5_74
Type: CAZyme
Location: 98325 - 100187 (-)
Gene ID: HRGMv2_3134_5_75
Type: CAZyme
Location: 100424 - 102649 (+)
Gene ID: HRGMv2_3134_5_76
Type: pfam
Location: 102759 - 105536 (+)
Gene ID: HRGMv2_3134_5_77
Type: CAZyme
Location: 105595 - 107403 (-)
Gene ID: HRGMv2_3134_5_78
Type: TF
Location: 107553 - 107978 (-)
Gene ID: HRGMv2_3134_5_79
Type: CAZyme
Location: 108016 - 109620 (-)
Gene ID: HRGMv2_3134_5_80
Type: TC
Location: 109875 - 110993 (+)
Gene ID: HRGMv2_3134_5_81
Type: TC
Location: 111028 - 111918 (+)
Gene ID: HRGMv2_3134_5_82
Type: TC
Location: 111931 - 112803 (+)
Gene ID: HRGMv2_3134_5_83
Type: STP
Location: 112800 - 114419 (+)
Gene ID: HRGMv2_3134_5_84
Type:
Location: 114562 - 115416 (+)
Gene ID: HRGMv2_3134_5_85
Type: CAZyme
Location: 115518 - 117017 (-)
Gene ID: HRGMv2_3134_5_86
Type: CAZyme
Location: 117040 - 118188 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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