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Cluster: HRGMv2_3127_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3127_11 HRGMv2_3127_11_15 20696 21631 + GT108
NULL(UNKNOWN) HRGMv2_3127_11 HRGMv2_3127_11_16 21691 23088 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3127_11 HRGMv2_3127_11_17 23170 24066 + 3.A.1.1.28
TC HRGMv2_3127_11 HRGMv2_3127_11_18 24082 24906 + 3.A.1.1.48
CAZyme HRGMv2_3127_11 HRGMv2_3127_11_19 24929 26008 + GH130_4
TF HRGMv2_3127_11 HRGMv2_3127_11_20 26194 27228 + LacI
CAZyme HRGMv2_3127_11 HRGMv2_3127_11_21 27255 28874 + GH13_23
CAZyme HRGMv2_3127_11 HRGMv2_3127_11_22 28871 31309 + GH2
Gene ID: HRGMv2_3127_11_15
Type: CAZyme
Location: 20696 - 21631 (+)
Gene ID: HRGMv2_3127_11_16
Type:
Location: 21691 - 23088 (+)
Gene ID: HRGMv2_3127_11_17
Type: TC
Location: 23170 - 24066 (+)
Gene ID: HRGMv2_3127_11_18
Type: TC
Location: 24082 - 24906 (+)
Gene ID: HRGMv2_3127_11_19
Type: CAZyme
Location: 24929 - 26008 (+)
Gene ID: HRGMv2_3127_11_20
Type: TF
Location: 26194 - 27228 (+)
Gene ID: HRGMv2_3127_11_21
Type: CAZyme
Location: 27255 - 28874 (+)
Gene ID: HRGMv2_3127_11_22
Type: CAZyme
Location: 28871 - 31309 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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