Cluster: HRGMv2_3127_CGC29
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3127
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3127_35 | HRGMv2_3127_35_7 | 10365 | 11297 | - | 3.A.1.1.29 |
| TC | HRGMv2_3127_35 | HRGMv2_3127_35_8 | 11322 | 12275 | - | 3.A.1.1.10 |
| TF | HRGMv2_3127_35 | HRGMv2_3127_35_9 | 12529 | 13605 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_3127_35 | HRGMv2_3127_35_10 | 13602 | 15389 | + | 9.B.33.1.1 |
| CAZyme | HRGMv2_3127_35 | HRGMv2_3127_35_11 | 15481 | 21219 | - | GH111 |
| CAZyme | HRGMv2_3127_35 | HRGMv2_3127_35_12 | 21545 | 22903 | + | GH29 |
| pfam | HRGMv2_3127_35 | HRGMv2_3127_35_13 | 23277 | 23972 | + | Semialdhyde_dh | Semialdhyde_dhC_1 |
| NULL(UNKNOWN) | HRGMv2_3127_35 | HRGMv2_3127_35_14 | 24007 | 24507 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3127_35 | HRGMv2_3127_35_15 | 24500 | 25174 | + | 3.A.1.122.2 |
| pfam | HRGMv2_3127_35 | HRGMv2_3127_35_16 | 25291 | 25668 | + | bPH_1 | bPH_3 |
| peptidase | HRGMv2_3127_35 | HRGMv2_3127_35_17 | 25771 | 27177 | - | M18.UPW |
| CAZyme | HRGMv2_3127_35 | HRGMv2_3127_35_18 | 27181 | 27774 | - | GH23 |
Gene ID: HRGMv2_3127_35_7
Type: TC
Location: 10365 - 11297 (-)
Type: TC
Location: 10365 - 11297 (-)
Gene ID: HRGMv2_3127_35_8
Type: TC
Location: 11322 - 12275 (-)
Type: TC
Location: 11322 - 12275 (-)
Gene ID: HRGMv2_3127_35_9
Type: TF
Location: 12529 - 13605 (+)
Type: TF
Location: 12529 - 13605 (+)
Gene ID: HRGMv2_3127_35_10
Type: TC
Location: 13602 - 15389 (+)
Type: TC
Location: 13602 - 15389 (+)
Gene ID: HRGMv2_3127_35_11
Type: CAZyme
Location: 15481 - 21219 (-)
Type: CAZyme
Location: 15481 - 21219 (-)
Gene ID: HRGMv2_3127_35_12
Type: CAZyme
Location: 21545 - 22903 (+)
Type: CAZyme
Location: 21545 - 22903 (+)
Gene ID: HRGMv2_3127_35_13
Type: pfam
Location: 23277 - 23972 (+)
Type: pfam
Location: 23277 - 23972 (+)
Gene ID: HRGMv2_3127_35_14
Type:
Location: 24007 - 24507 (+)
Type:
Location: 24007 - 24507 (+)
Gene ID: HRGMv2_3127_35_15
Type: TC
Location: 24500 - 25174 (+)
Type: TC
Location: 24500 - 25174 (+)
Gene ID: HRGMv2_3127_35_16
Type: pfam
Location: 25291 - 25668 (+)
Type: pfam
Location: 25291 - 25668 (+)
Gene ID: HRGMv2_3127_35_17
Type: peptidase
Location: 25771 - 27177 (-)
Type: peptidase
Location: 25771 - 27177 (-)
Gene ID: HRGMv2_3127_35_18
Type: CAZyme
Location: 27181 - 27774 (-)
Type: CAZyme
Location: 27181 - 27774 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Fournierella
Species
Fournierella sp002159185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.