Cluster: HRGMv2_3127_CGC20
🧬 Cluster Details
- Gene Count: 28
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_3127
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3127_30 | HRGMv2_3127_30_53 | 58232 | 60484 | - | GH36 |
| TC | HRGMv2_3127_30 | HRGMv2_3127_30_54 | 60630 | 61460 | - | 3.A.1.1.34 |
| TC | HRGMv2_3127_30 | HRGMv2_3127_30_55 | 61464 | 62348 | - | 3.A.1.1.25 |
| TC | HRGMv2_3127_30 | HRGMv2_3127_30_56 | 62364 | 63644 | - | 3.A.1.1.44 |
| TF | HRGMv2_3127_30 | HRGMv2_3127_30_57 | 63954 | 64826 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_3127_30 | HRGMv2_3127_30_58 | 64920 | 67478 | + | 2.A.21.9.1 |
| STP | HRGMv2_3127_30 | HRGMv2_3127_30_59 | 67661 | 69604 | + | HATPase_c | HisKA |
| TF | HRGMv2_3127_30 | HRGMv2_3127_30_60 | 69601 | 70269 | + | Trans_reg_C |
| TC | HRGMv2_3127_30 | HRGMv2_3127_30_61 | 70347 | 71681 | - | 2.A.66.1.37 |
| TF | HRGMv2_3127_30 | HRGMv2_3127_30_62 | 71787 | 72602 | + | MerR |
| pfam | HRGMv2_3127_30 | HRGMv2_3127_30_63 | 72748 | 73677 | - | NTP_transferase |
| TC | HRGMv2_3127_30 | HRGMv2_3127_30_64 | 74318 | 75112 | + | 9.B.18.1.1 |
| CAZyme | HRGMv2_3127_30 | HRGMv2_3127_30_65 | 75140 | 76201 | + | GT2 |
| pfam | HRGMv2_3127_30 | HRGMv2_3127_30_66 | 76206 | 77189 | + | Acyl_transf_3 |
| CAZyme | HRGMv2_3127_30 | HRGMv2_3127_30_67 | 77176 | 78108 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_3127_30 | HRGMv2_3127_30_68 | 78118 | 79305 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3127_30 | HRGMv2_3127_30_69 | 79354 | 80571 | + | 2.A.66.2.10 |
| pfam | HRGMv2_3127_30 | HRGMv2_3127_30_70 | 80571 | 81686 | + | PS_pyruv_trans |
| CAZyme | HRGMv2_3127_30 | HRGMv2_3127_30_71 | 81697 | 82704 | + | GT2 |
| pfam | HRGMv2_3127_30 | HRGMv2_3127_30_72 | 82778 | 84157 | - | Lyase_1 | ASL_C2 |
| TC | HRGMv2_3127_30 | HRGMv2_3127_30_73 | 84262 | 84984 | - | 3.A.1.3.15 |
| TC | HRGMv2_3127_30 | HRGMv2_3127_30_74 | 84971 | 85636 | - | 3.A.1.3.15 |
| TC | HRGMv2_3127_30 | HRGMv2_3127_30_75 | 85677 | 86555 | - | 3.A.1.3.15 |
| CAZyme | HRGMv2_3127_30 | HRGMv2_3127_30_76 | 86932 | 87804 | + | CE4 |
| CAZyme | HRGMv2_3127_30 | HRGMv2_3127_30_77 | 87801 | 88667 | + | CE4 |
| TF | HRGMv2_3127_30 | HRGMv2_3127_30_78 | 88817 | 89797 | - | LacI |
| NULL(UNKNOWN) | HRGMv2_3127_30 | HRGMv2_3127_30_79 | 89966 | 90931 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3127_30 | HRGMv2_3127_30_80 | 90965 | 92671 | + | GH13_18 |
Gene ID: HRGMv2_3127_30_53
Type: CAZyme
Location: 58232 - 60484 (-)
Type: CAZyme
Location: 58232 - 60484 (-)
Gene ID: HRGMv2_3127_30_54
Type: TC
Location: 60630 - 61460 (-)
Type: TC
Location: 60630 - 61460 (-)
Gene ID: HRGMv2_3127_30_55
Type: TC
Location: 61464 - 62348 (-)
Type: TC
Location: 61464 - 62348 (-)
Gene ID: HRGMv2_3127_30_56
Type: TC
Location: 62364 - 63644 (-)
Type: TC
Location: 62364 - 63644 (-)
Gene ID: HRGMv2_3127_30_57
Type: TF
Location: 63954 - 64826 (+)
Type: TF
Location: 63954 - 64826 (+)
Gene ID: HRGMv2_3127_30_58
Type: TC
Location: 64920 - 67478 (+)
Type: TC
Location: 64920 - 67478 (+)
Gene ID: HRGMv2_3127_30_59
Type: STP
Location: 67661 - 69604 (+)
Type: STP
Location: 67661 - 69604 (+)
Gene ID: HRGMv2_3127_30_60
Type: TF
Location: 69601 - 70269 (+)
Type: TF
Location: 69601 - 70269 (+)
Gene ID: HRGMv2_3127_30_61
Type: TC
Location: 70347 - 71681 (-)
Type: TC
Location: 70347 - 71681 (-)
Gene ID: HRGMv2_3127_30_62
Type: TF
Location: 71787 - 72602 (+)
Type: TF
Location: 71787 - 72602 (+)
Gene ID: HRGMv2_3127_30_63
Type: pfam
Location: 72748 - 73677 (-)
Type: pfam
Location: 72748 - 73677 (-)
Gene ID: HRGMv2_3127_30_64
Type: TC
Location: 74318 - 75112 (+)
Type: TC
Location: 74318 - 75112 (+)
Gene ID: HRGMv2_3127_30_65
Type: CAZyme
Location: 75140 - 76201 (+)
Type: CAZyme
Location: 75140 - 76201 (+)
Gene ID: HRGMv2_3127_30_66
Type: pfam
Location: 76206 - 77189 (+)
Type: pfam
Location: 76206 - 77189 (+)
Gene ID: HRGMv2_3127_30_67
Type: CAZyme
Location: 77176 - 78108 (+)
Type: CAZyme
Location: 77176 - 78108 (+)
Gene ID: HRGMv2_3127_30_68
Type:
Location: 78118 - 79305 (+)
Type:
Location: 78118 - 79305 (+)
Gene ID: HRGMv2_3127_30_69
Type: TC
Location: 79354 - 80571 (+)
Type: TC
Location: 79354 - 80571 (+)
Gene ID: HRGMv2_3127_30_70
Type: pfam
Location: 80571 - 81686 (+)
Type: pfam
Location: 80571 - 81686 (+)
Gene ID: HRGMv2_3127_30_71
Type: CAZyme
Location: 81697 - 82704 (+)
Type: CAZyme
Location: 81697 - 82704 (+)
Gene ID: HRGMv2_3127_30_72
Type: pfam
Location: 82778 - 84157 (-)
Type: pfam
Location: 82778 - 84157 (-)
Gene ID: HRGMv2_3127_30_73
Type: TC
Location: 84262 - 84984 (-)
Type: TC
Location: 84262 - 84984 (-)
Gene ID: HRGMv2_3127_30_74
Type: TC
Location: 84971 - 85636 (-)
Type: TC
Location: 84971 - 85636 (-)
Gene ID: HRGMv2_3127_30_75
Type: TC
Location: 85677 - 86555 (-)
Type: TC
Location: 85677 - 86555 (-)
Gene ID: HRGMv2_3127_30_76
Type: CAZyme
Location: 86932 - 87804 (+)
Type: CAZyme
Location: 86932 - 87804 (+)
Gene ID: HRGMv2_3127_30_77
Type: CAZyme
Location: 87801 - 88667 (+)
Type: CAZyme
Location: 87801 - 88667 (+)
Gene ID: HRGMv2_3127_30_78
Type: TF
Location: 88817 - 89797 (-)
Type: TF
Location: 88817 - 89797 (-)
Gene ID: HRGMv2_3127_30_79
Type:
Location: 89966 - 90931 (+)
Type:
Location: 89966 - 90931 (+)
Gene ID: HRGMv2_3127_30_80
Type: CAZyme
Location: 90965 - 92671 (+)
Type: CAZyme
Location: 90965 - 92671 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Fournierella
Species
Fournierella sp002159185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.