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Cluster: HRGMv2_3127_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3127_25 HRGMv2_3127_25_92 99303 100700 - 3.A.2.1.5
TC HRGMv2_3127_25 HRGMv2_3127_25_93 100733 101584 - 3.A.2.1.5
TC HRGMv2_3127_25 HRGMv2_3127_25_94 101598 103112 - 3.A.2.1.5
pfam HRGMv2_3127_25 HRGMv2_3127_25_95 103129 103665 - OSCP
pfam HRGMv2_3127_25 HRGMv2_3127_25_96 103662 104168 - ATP-synt_B
TC HRGMv2_3127_25 HRGMv2_3127_25_97 104206 104472 - 3.A.2.1.2
TC HRGMv2_3127_25 HRGMv2_3127_25_98 104594 105358 - 3.A.2.1.5
pfam HRGMv2_3127_25 HRGMv2_3127_25_99 105355 105789 - ATP-synt_I
pfam HRGMv2_3127_25 HRGMv2_3127_25_100 105810 106067 - ATPase_gene1
CAZyme HRGMv2_3127_25 HRGMv2_3127_25_101 106393 107340 + GT2
STP HRGMv2_3127_25 HRGMv2_3127_25_102 107840 108835 + Peripla_BP_2
TC HRGMv2_3127_25 HRGMv2_3127_25_103 108832 109866 + 3.A.1.14.21
TC HRGMv2_3127_25 HRGMv2_3127_25_104 109866 110621 + 3.A.1.14.14
Gene ID: HRGMv2_3127_25_92
Type: TC
Location: 99303 - 100700 (-)
Gene ID: HRGMv2_3127_25_93
Type: TC
Location: 100733 - 101584 (-)
Gene ID: HRGMv2_3127_25_94
Type: TC
Location: 101598 - 103112 (-)
Gene ID: HRGMv2_3127_25_95
Type: pfam
Location: 103129 - 103665 (-)
Gene ID: HRGMv2_3127_25_96
Type: pfam
Location: 103662 - 104168 (-)
Gene ID: HRGMv2_3127_25_97
Type: TC
Location: 104206 - 104472 (-)
Gene ID: HRGMv2_3127_25_98
Type: TC
Location: 104594 - 105358 (-)
Gene ID: HRGMv2_3127_25_99
Type: pfam
Location: 105355 - 105789 (-)
Gene ID: HRGMv2_3127_25_100
Type: pfam
Location: 105810 - 106067 (-)
Gene ID: HRGMv2_3127_25_101
Type: CAZyme
Location: 106393 - 107340 (+)
Gene ID: HRGMv2_3127_25_102
Type: STP
Location: 107840 - 108835 (+)
Gene ID: HRGMv2_3127_25_103
Type: TC
Location: 108832 - 109866 (+)
Gene ID: HRGMv2_3127_25_104
Type: TC
Location: 109866 - 110621 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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