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Cluster: HRGMv2_3127_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3127_22 HRGMv2_3127_22_34 33920 36373 - GT2 | GT4
CAZyme HRGMv2_3127_22 HRGMv2_3127_22_35 36393 38258 - GT111 | GT8
TC HRGMv2_3127_22 HRGMv2_3127_22_36 38295 39035 - 3.A.1.103.1
TC HRGMv2_3127_22 HRGMv2_3127_22_37 39050 39847 - 3.A.1.103.4
CAZyme HRGMv2_3127_22 HRGMv2_3127_22_38 41122 43158 - GH25
CAZyme HRGMv2_3127_22 HRGMv2_3127_22_39 43210 44124 - GT2
CAZyme HRGMv2_3127_22 HRGMv2_3127_22_40 44139 45035 - GT2
pfam HRGMv2_3127_22 HRGMv2_3127_22_41 45051 46157 - FAD_binding_3 | Amino_oxidase | GLF | NAD_binding_8
CAZyme HRGMv2_3127_22 HRGMv2_3127_22_42 46223 46990 - GT111
Gene ID: HRGMv2_3127_22_34
Type: CAZyme
Location: 33920 - 36373 (-)
Gene ID: HRGMv2_3127_22_35
Type: CAZyme
Location: 36393 - 38258 (-)
Gene ID: HRGMv2_3127_22_36
Type: TC
Location: 38295 - 39035 (-)
Gene ID: HRGMv2_3127_22_37
Type: TC
Location: 39050 - 39847 (-)
Gene ID: HRGMv2_3127_22_38
Type: CAZyme
Location: 41122 - 43158 (-)
Gene ID: HRGMv2_3127_22_39
Type: CAZyme
Location: 43210 - 44124 (-)
Gene ID: HRGMv2_3127_22_40
Type: CAZyme
Location: 44139 - 45035 (-)
Gene ID: HRGMv2_3127_22_41
Type: pfam
Location: 45051 - 46157 (-)
Gene ID: HRGMv2_3127_22_42
Type: CAZyme
Location: 46223 - 46990 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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