Cluster: HRGMv2_3117_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3117
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3117_26 | HRGMv2_3117_26_10 | 11863 | 14427 | + | GT51 |
| pfam | HRGMv2_3117_26 | HRGMv2_3117_26_11 | 14441 | 15313 | + | Cons_hypoth95 | Methyltrans_SAM |
| TC | HRGMv2_3117_26 | HRGMv2_3117_26_12 | 15362 | 16210 | + | 3.A.1.26.7 |
| TC | HRGMv2_3117_26 | HRGMv2_3117_26_13 | 16230 | 17096 | + | 3.A.1.26.7 |
| TC | HRGMv2_3117_26 | HRGMv2_3117_26_14 | 17090 | 17896 | + | 3.A.1.25.4 |
Gene ID: HRGMv2_3117_26_10
Type: CAZyme
Location: 11863 - 14427 (+)
Type: CAZyme
Location: 11863 - 14427 (+)
Gene ID: HRGMv2_3117_26_11
Type: pfam
Location: 14441 - 15313 (+)
Type: pfam
Location: 14441 - 15313 (+)
Gene ID: HRGMv2_3117_26_12
Type: TC
Location: 15362 - 16210 (+)
Type: TC
Location: 15362 - 16210 (+)
Gene ID: HRGMv2_3117_26_13
Type: TC
Location: 16230 - 17096 (+)
Type: TC
Location: 16230 - 17096 (+)
Gene ID: HRGMv2_3117_26_14
Type: TC
Location: 17090 - 17896 (+)
Type: TC
Location: 17090 - 17896 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3117_26_11 | vegetarian > omnivore | 1.05365 | 0.02695 |
| HRGMv2_3117_26_11 | vegetarian > vegan | 1.00807 | 0.00181 |