Cluster: HRGMv2_3117_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3117
- CGC Family ID: CGCFAM_06203
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3117_9 | HRGMv2_3117_9_13 | 13877 | 15187 | + | GH13_20 |
| TC | HRGMv2_3117_9 | HRGMv2_3117_9_14 | 15286 | 17934 | - | 3.A.3.2.21 |
| TC | HRGMv2_3117_9 | HRGMv2_3117_9_15 | 18223 | 19500 | - | 2.A.45.2.2 |
Gene ID: HRGMv2_3117_9_13
Type: CAZyme
Location: 13877 - 15187 (+)
Type: CAZyme
Location: 13877 - 15187 (+)
Gene ID: HRGMv2_3117_9_14
Type: TC
Location: 15286 - 17934 (-)
Type: TC
Location: 15286 - 17934 (-)
Gene ID: HRGMv2_3117_9_15
Type: TC
Location: 18223 - 19500 (-)
Type: TC
Location: 18223 - 19500 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3117_9_14 | vegetarian > vegan | 1.22382 | 0.00181 |