dbCAN Logo

Cluster: HRGMv2_3117_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3117_8 HRGMv2_3117_8_29 33534 34907 - 2.A.66.1.33
STP HRGMv2_3117_8 HRGMv2_3117_8_30 35639 36250 + TetR_N
TC HRGMv2_3117_8 HRGMv2_3117_8_31 36255 37136 + 3.A.1.126.1
pfam HRGMv2_3117_8 HRGMv2_3117_8_32 37133 37918 + ABC2_membrane_2 | ABC2_membrane_5
NULL(UNKNOWN) HRGMv2_3117_8 HRGMv2_3117_8_33 37727 38161 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3117_8 HRGMv2_3117_8_34 38441 39289 + 2.A.119.2.2
pfam HRGMv2_3117_8 HRGMv2_3117_8_35 39479 40549 + APH
NULL(UNKNOWN) HRGMv2_3117_8 HRGMv2_3117_8_36 40574 41953 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3117_8 HRGMv2_3117_8_37 42050 43066 + CE9
Gene ID: HRGMv2_3117_8_29
Type: TC
Location: 33534 - 34907 (-)
Gene ID: HRGMv2_3117_8_30
Type: STP
Location: 35639 - 36250 (+)
Gene ID: HRGMv2_3117_8_31
Type: TC
Location: 36255 - 37136 (+)
Gene ID: HRGMv2_3117_8_32
Type: pfam
Location: 37133 - 37918 (+)
Gene ID: HRGMv2_3117_8_33
Type:
Location: 37727 - 38161 (-)
Gene ID: HRGMv2_3117_8_34
Type: TC
Location: 38441 - 39289 (+)
Gene ID: HRGMv2_3117_8_35
Type: pfam
Location: 39479 - 40549 (+)
Gene ID: HRGMv2_3117_8_36
Type:
Location: 40574 - 41953 (+)
Gene ID: HRGMv2_3117_8_37
Type: CAZyme
Location: 42050 - 43066 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Oscillospiraceae
→
Genus
Faecousia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List