Cluster: HRGMv2_3117_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3117
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3117_8 | HRGMv2_3117_8_4 | 3883 | 5361 | + | GH77 |
| CAZyme | HRGMv2_3117_8 | HRGMv2_3117_8_5 | 5429 | 7762 | + | GT35 |
| STP | HRGMv2_3117_8 | HRGMv2_3117_8_6 | 7960 | 9801 | - | SIS | SIS |
| pfam | HRGMv2_3117_8 | HRGMv2_3117_8_7 | 9960 | 10847 | - | DNA_processg_A |
| TC | HRGMv2_3117_8 | HRGMv2_3117_8_8 | 10844 | 12031 | - | 3.A.18.1.1 |
Gene ID: HRGMv2_3117_8_4
Type: CAZyme
Location: 3883 - 5361 (+)
Type: CAZyme
Location: 3883 - 5361 (+)
Gene ID: HRGMv2_3117_8_5
Type: CAZyme
Location: 5429 - 7762 (+)
Type: CAZyme
Location: 5429 - 7762 (+)
Gene ID: HRGMv2_3117_8_6
Type: STP
Location: 7960 - 9801 (-)
Type: STP
Location: 7960 - 9801 (-)
Gene ID: HRGMv2_3117_8_7
Type: pfam
Location: 9960 - 10847 (-)
Type: pfam
Location: 9960 - 10847 (-)
Gene ID: HRGMv2_3117_8_8
Type: TC
Location: 10844 - 12031 (-)
Type: TC
Location: 10844 - 12031 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.