Cluster: HRGMv2_3117_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3117
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3117_63 | HRGMv2_3117_63_2 | 661 | 1296 | - | 9.B.28.1.2 |
| STP | HRGMv2_3117_63 | HRGMv2_3117_63_3 | 1315 | 2772 | - | SBP_bac_1 |
| TF | HRGMv2_3117_63 | HRGMv2_3117_63_4 | 2733 | 3608 | - | HTH_AraC |
| TC | HRGMv2_3117_63 | HRGMv2_3117_63_5 | 3610 | 5340 | - | 8.A.59.2.1 |
| pfam | HRGMv2_3117_63 | HRGMv2_3117_63_6 | 5630 | 6523 | + | ROK |
| pfam | HRGMv2_3117_63 | HRGMv2_3117_63_7 | 6520 | 7455 | + | PMI_typeI_cat | MPI_cupin_dom |
| CAZyme | HRGMv2_3117_63 | HRGMv2_3117_63_8 | 7997 | 14443 | + | GH85 |
Gene ID: HRGMv2_3117_63_2
Type: TC
Location: 661 - 1296 (-)
Type: TC
Location: 661 - 1296 (-)
Gene ID: HRGMv2_3117_63_3
Type: STP
Location: 1315 - 2772 (-)
Type: STP
Location: 1315 - 2772 (-)
Gene ID: HRGMv2_3117_63_4
Type: TF
Location: 2733 - 3608 (-)
Type: TF
Location: 2733 - 3608 (-)
Gene ID: HRGMv2_3117_63_5
Type: TC
Location: 3610 - 5340 (-)
Type: TC
Location: 3610 - 5340 (-)
Gene ID: HRGMv2_3117_63_6
Type: pfam
Location: 5630 - 6523 (+)
Type: pfam
Location: 5630 - 6523 (+)
Gene ID: HRGMv2_3117_63_7
Type: pfam
Location: 6520 - 7455 (+)
Type: pfam
Location: 6520 - 7455 (+)
Gene ID: HRGMv2_3117_63_8
Type: CAZyme
Location: 7997 - 14443 (+)
Type: CAZyme
Location: 7997 - 14443 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.