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Cluster: HRGMv2_3117_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3117_36 HRGMv2_3117_36_2 384 2894 + 3.A.3.5.15
peptidase HRGMv2_3117_36 HRGMv2_3117_36_3 2891 3808 + S33.UPW
CAZyme HRGMv2_3117_36 HRGMv2_3117_36_4 3938 5155 + GH24
pfam HRGMv2_3117_36 HRGMv2_3117_36_5 5424 6164 + PseudoU_synth_1 | PseudoU_synth_1
pfam HRGMv2_3117_36 HRGMv2_3117_36_6 6161 6502 + ArsC
TC HRGMv2_3117_36 HRGMv2_3117_36_7 6601 7971 + 2.A.25.1.9
pfam HRGMv2_3117_36 HRGMv2_3117_36_8 8019 9665 + tRNA-synt_1c | Anticodon_2
CAZyme HRGMv2_3117_36 HRGMv2_3117_36_9 9975 16055 + GH85
CAZyme HRGMv2_3117_36 HRGMv2_3117_36_10 16416 18290 + GH20
Gene ID: HRGMv2_3117_36_2
Type: TC
Location: 384 - 2894 (+)
Gene ID: HRGMv2_3117_36_3
Type: peptidase
Location: 2891 - 3808 (+)
Gene ID: HRGMv2_3117_36_4
Type: CAZyme
Location: 3938 - 5155 (+)
Gene ID: HRGMv2_3117_36_5
Type: pfam
Location: 5424 - 6164 (+)
Gene ID: HRGMv2_3117_36_6
Type: pfam
Location: 6161 - 6502 (+)
Gene ID: HRGMv2_3117_36_7
Type: TC
Location: 6601 - 7971 (+)
Gene ID: HRGMv2_3117_36_8
Type: pfam
Location: 8019 - 9665 (+)
Gene ID: HRGMv2_3117_36_9
Type: CAZyme
Location: 9975 - 16055 (+)
Gene ID: HRGMv2_3117_36_10
Type: CAZyme
Location: 16416 - 18290 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Oscillospiraceae
→
Genus
Faecousia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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