Cluster: HRGMv2_3117_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_3117
- CGC Family ID: CGCFAM_00246
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3117_1 | HRGMv2_3117_1_45 | 38947 | 40707 | + | GH35 |
| TC | HRGMv2_3117_1 | HRGMv2_3117_1_46 | 41044 | 42027 | + | 3.A.1.1.10 |
| TC | HRGMv2_3117_1 | HRGMv2_3117_1_47 | 42042 | 42965 | + | 3.A.1.1.29 |
| pfam | HRGMv2_3117_1 | HRGMv2_3117_1_48 | 43046 | 44557 | + | DUF3502 |
| CAZyme | HRGMv2_3117_1 | HRGMv2_3117_1_49 | 44903 | 45889 | + | GH130_2 |
| CAZyme | HRGMv2_3117_1 | HRGMv2_3117_1_50 | 45946 | 49101 | + | GH38 |
| CAZyme | HRGMv2_3117_1 | HRGMv2_3117_1_51 | 49224 | 51488 | + | GH3 |
Gene ID: HRGMv2_3117_1_45
Type: CAZyme
Location: 38947 - 40707 (+)
Type: CAZyme
Location: 38947 - 40707 (+)
Gene ID: HRGMv2_3117_1_46
Type: TC
Location: 41044 - 42027 (+)
Type: TC
Location: 41044 - 42027 (+)
Gene ID: HRGMv2_3117_1_47
Type: TC
Location: 42042 - 42965 (+)
Type: TC
Location: 42042 - 42965 (+)
Gene ID: HRGMv2_3117_1_48
Type: pfam
Location: 43046 - 44557 (+)
Type: pfam
Location: 43046 - 44557 (+)
Gene ID: HRGMv2_3117_1_49
Type: CAZyme
Location: 44903 - 45889 (+)
Type: CAZyme
Location: 44903 - 45889 (+)
Gene ID: HRGMv2_3117_1_50
Type: CAZyme
Location: 45946 - 49101 (+)
Type: CAZyme
Location: 45946 - 49101 (+)
Gene ID: HRGMv2_3117_1_51
Type: CAZyme
Location: 49224 - 51488 (+)
Type: CAZyme
Location: 49224 - 51488 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.