Cluster: HRGMv2_3099_CGC6
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3099
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3099_6 | HRGMv2_3099_6_135 | 120257 | 122992 | - | 3.A.5.1.3 |
| NULL(UNKNOWN) | HRGMv2_3099_6 | HRGMv2_3099_6_136 | 123256 | 123585 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_3099_6 | HRGMv2_3099_6_137 | 123800 | 124708 | - | HTH_1 |
| TC | HRGMv2_3099_6 | HRGMv2_3099_6_138 | 124978 | 126225 | + | 2.A.37.3.3 |
| peptidase | HRGMv2_3099_6 | HRGMv2_3099_6_139 | 126277 | 126945 | - | S54.UNW |
| pfam | HRGMv2_3099_6 | HRGMv2_3099_6_140 | 127143 | 127394 | - | FakA-like_M |
| TC | HRGMv2_3099_6 | HRGMv2_3099_6_141 | 127477 | 128790 | - | 2.A.26.1.1 |
| CAZyme | HRGMv2_3099_6 | HRGMv2_3099_6_142 | 129025 | 129702 | + | CBM54 |
| TC | HRGMv2_3099_6 | HRGMv2_3099_6_143 | 129957 | 131744 | - | 2.A.58.2.2 |
| CAZyme | HRGMv2_3099_6 | HRGMv2_3099_6_144 | 132042 | 133004 | - | CE4 |
| pfam | HRGMv2_3099_6 | HRGMv2_3099_6_145 | 133274 | 134575 | + | Enolase_C | Enolase_N |
| CAZyme | HRGMv2_3099_6 | HRGMv2_3099_6_146 | 134660 | 136990 | - | CBM54 |
Gene ID: HRGMv2_3099_6_135
Type: TC
Location: 120257 - 122992 (-)
Type: TC
Location: 120257 - 122992 (-)
Gene ID: HRGMv2_3099_6_136
Type:
Location: 123256 - 123585 (+)
Type:
Location: 123256 - 123585 (+)
Gene ID: HRGMv2_3099_6_137
Type: TF
Location: 123800 - 124708 (-)
Type: TF
Location: 123800 - 124708 (-)
Gene ID: HRGMv2_3099_6_138
Type: TC
Location: 124978 - 126225 (+)
Type: TC
Location: 124978 - 126225 (+)
Gene ID: HRGMv2_3099_6_139
Type: peptidase
Location: 126277 - 126945 (-)
Type: peptidase
Location: 126277 - 126945 (-)
Gene ID: HRGMv2_3099_6_140
Type: pfam
Location: 127143 - 127394 (-)
Type: pfam
Location: 127143 - 127394 (-)
Gene ID: HRGMv2_3099_6_141
Type: TC
Location: 127477 - 128790 (-)
Type: TC
Location: 127477 - 128790 (-)
Gene ID: HRGMv2_3099_6_142
Type: CAZyme
Location: 129025 - 129702 (+)
Type: CAZyme
Location: 129025 - 129702 (+)
Gene ID: HRGMv2_3099_6_143
Type: TC
Location: 129957 - 131744 (-)
Type: TC
Location: 129957 - 131744 (-)
Gene ID: HRGMv2_3099_6_144
Type: CAZyme
Location: 132042 - 133004 (-)
Type: CAZyme
Location: 132042 - 133004 (-)
Gene ID: HRGMv2_3099_6_145
Type: pfam
Location: 133274 - 134575 (+)
Type: pfam
Location: 133274 - 134575 (+)
Gene ID: HRGMv2_3099_6_146
Type: CAZyme
Location: 134660 - 136990 (-)
Type: CAZyme
Location: 134660 - 136990 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdimmobilis
Species
Merdimmobilis hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.