Cluster: HRGMv2_3099_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3099
- CGC Family ID: CGCFAM_00185
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3099_16 | HRGMv2_3099_16_15 | 11866 | 13218 | + | 1.A.26.1.2 |
| pfam | HRGMv2_3099_16 | HRGMv2_3099_16_16 | 13479 | 13754 | + | Zn_ribbon_2 |
| CAZyme | HRGMv2_3099_16 | HRGMv2_3099_16_17 | 13826 | 14926 | - | GT2 |
Gene ID: HRGMv2_3099_16_15
Type: TC
Location: 11866 - 13218 (+)
Type: TC
Location: 11866 - 13218 (+)
Gene ID: HRGMv2_3099_16_16
Type: pfam
Location: 13479 - 13754 (+)
Type: pfam
Location: 13479 - 13754 (+)
Gene ID: HRGMv2_3099_16_17
Type: CAZyme
Location: 13826 - 14926 (-)
Type: CAZyme
Location: 13826 - 14926 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdimmobilis
Species
Merdimmobilis hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3099_16_16 | omnivore > vegan | 17.22638 | 0.04853 |
| HRGMv2_3099_16_16 | vegetarian > vegan | 13.79477 | 0.04449 |