Cluster: HRGMv2_3092_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3092
- CGC Family ID: CGCFAM_10297
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3092_11 | HRGMv2_3092_11_22 | 23778 | 24875 | + | 9.B.102.1.14 |
| pfam | HRGMv2_3092_11 | HRGMv2_3092_11_23 | 24872 | 25075 | + | TusA |
| CAZyme | HRGMv2_3092_11 | HRGMv2_3092_11_24 | 25177 | 25932 | + | CE4 |
| TC | HRGMv2_3092_11 | HRGMv2_3092_11_25 | 25958 | 30937 | + | 1.C.39.4.6 |
Gene ID: HRGMv2_3092_11_22
Type: TC
Location: 23778 - 24875 (+)
Type: TC
Location: 23778 - 24875 (+)
Gene ID: HRGMv2_3092_11_23
Type: pfam
Location: 24872 - 25075 (+)
Type: pfam
Location: 24872 - 25075 (+)
Gene ID: HRGMv2_3092_11_24
Type: CAZyme
Location: 25177 - 25932 (+)
Type: CAZyme
Location: 25177 - 25932 (+)
Gene ID: HRGMv2_3092_11_25
Type: TC
Location: 25958 - 30937 (+)
Type: TC
Location: 25958 - 30937 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Hominicoprocola
Species
Hominicoprocola sp900768135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3092_11_23 | vegetarian > vegan | 1.39828 | 0.00012 |