Cluster: HRGMv2_3092_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3092
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3092_7 | HRGMv2_3092_7_47 | 44573 | 45901 | + | 3.A.1.1.45 |
| TC | HRGMv2_3092_7 | HRGMv2_3092_7_48 | 46040 | 46954 | + | 3.A.1.1.45 |
| TC | HRGMv2_3092_7 | HRGMv2_3092_7_49 | 46954 | 47811 | + | 3.A.1.1.45 |
| CAZyme | HRGMv2_3092_7 | HRGMv2_3092_7_50 | 47860 | 49347 | + | GH77 |
Gene ID: HRGMv2_3092_7_47
Type: TC
Location: 44573 - 45901 (+)
Type: TC
Location: 44573 - 45901 (+)
Gene ID: HRGMv2_3092_7_48
Type: TC
Location: 46040 - 46954 (+)
Type: TC
Location: 46040 - 46954 (+)
Gene ID: HRGMv2_3092_7_49
Type: TC
Location: 46954 - 47811 (+)
Type: TC
Location: 46954 - 47811 (+)
Gene ID: HRGMv2_3092_7_50
Type: CAZyme
Location: 47860 - 49347 (+)
Type: CAZyme
Location: 47860 - 49347 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Hominicoprocola
Species
Hominicoprocola sp900768135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3092_7_48 | vegan > omnivore | 1.04852 | 0.00566 |