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Cluster: HRGMv2_3092_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3092_3 HRGMv2_3092_3_59 56800 58131 - 2.A.37.3.3
TC HRGMv2_3092_3 HRGMv2_3092_3_60 58310 59956 - 3.A.1.5.41
TC HRGMv2_3092_3 HRGMv2_3092_3_61 60134 61288 - 3.A.18.1.1
NULL(UNKNOWN) HRGMv2_3092_3 HRGMv2_3092_3_62 61366 61995 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3092_3 HRGMv2_3092_3_63 62289 64697 - GT35
CAZyme HRGMv2_3092_3 HRGMv2_3092_3_64 64716 66149 - GT5
pfam HRGMv2_3092_3 HRGMv2_3092_3_65 66188 67300 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_3092_3 HRGMv2_3092_3_66 67297 68505 - NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_3092_3 HRGMv2_3092_3_67 68551 70500 - CBM48 | GH13_9
Gene ID: HRGMv2_3092_3_59
Type: TC
Location: 56800 - 58131 (-)
Gene ID: HRGMv2_3092_3_60
Type: TC
Location: 58310 - 59956 (-)
Gene ID: HRGMv2_3092_3_61
Type: TC
Location: 60134 - 61288 (-)
Gene ID: HRGMv2_3092_3_62
Type:
Location: 61366 - 61995 (-)
Gene ID: HRGMv2_3092_3_63
Type: CAZyme
Location: 62289 - 64697 (-)
Gene ID: HRGMv2_3092_3_64
Type: CAZyme
Location: 64716 - 66149 (-)
Gene ID: HRGMv2_3092_3_65
Type: pfam
Location: 66188 - 67300 (-)
Gene ID: HRGMv2_3092_3_66
Type: pfam
Location: 67297 - 68505 (-)
Gene ID: HRGMv2_3092_3_67
Type: CAZyme
Location: 68551 - 70500 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3092_3_60 vegetarian > vegan 2.02959 0.00012
HRGMv2_3092_3_62 vegetarian > vegan 1.58713 0.00012
HRGMv2_3092_3_65 vegetarian > vegan 1.39310 0.00012

🧭 Explore Read Mapping of CGC

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