Cluster: HRGMv2_3092_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3092
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3092_22 | HRGMv2_3092_22_2 | 350 | 1471 | - | GT28 |
| TC | HRGMv2_3092_22 | HRGMv2_3092_22_3 | 1490 | 2671 | - | 2.A.103.1.3 |
| TC | HRGMv2_3092_22 | HRGMv2_3092_22_4 | 2711 | 3676 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_3092_22_2
Type: CAZyme
Location: 350 - 1471 (-)
Type: CAZyme
Location: 350 - 1471 (-)
Gene ID: HRGMv2_3092_22_3
Type: TC
Location: 1490 - 2671 (-)
Type: TC
Location: 1490 - 2671 (-)
Gene ID: HRGMv2_3092_22_4
Type: TC
Location: 2711 - 3676 (-)
Type: TC
Location: 2711 - 3676 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Hominicoprocola
Species
Hominicoprocola sp900768135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3092_22_4 | vegetarian > vegan | 1.00030 | 0.00012 |