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Cluster: HRGMv2_3092_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3092_1 HRGMv2_3092_1_473 406150 407466 - 2.A.35.1.4
pfam HRGMv2_3092_1 HRGMv2_3092_1_474 407936 409039 - PAD_porph
TC HRGMv2_3092_1 HRGMv2_3092_1_475 409069 410442 - 2.A.3.7.7
pfam HRGMv2_3092_1 HRGMv2_3092_1_476 410447 411496 - OTCace | OTCace_N
TC HRGMv2_3092_1 HRGMv2_3092_1_477 411728 413491 + 2.A.58.2.2
CAZyme HRGMv2_3092_1 HRGMv2_3092_1_478 413575 415599 - GH24 | GH25
Gene ID: HRGMv2_3092_1_473
Type: TC
Location: 406150 - 407466 (-)
Gene ID: HRGMv2_3092_1_474
Type: pfam
Location: 407936 - 409039 (-)
Gene ID: HRGMv2_3092_1_475
Type: TC
Location: 409069 - 410442 (-)
Gene ID: HRGMv2_3092_1_476
Type: pfam
Location: 410447 - 411496 (-)
Gene ID: HRGMv2_3092_1_477
Type: TC
Location: 411728 - 413491 (+)
Gene ID: HRGMv2_3092_1_478
Type: CAZyme
Location: 413575 - 415599 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3092_1_478 vegetarian > vegan 1.28393 0.00012

🧭 Explore Read Mapping of CGC

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