Cluster: HRGMv2_3081_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3081
- CGC Family ID: CGCFAM_00918
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3081_9 | HRGMv2_3081_9_68 | 71104 | 73005 | - | GH127 |
| TF | HRGMv2_3081_9 | HRGMv2_3081_9_69 | 73094 | 73894 | + | HTH_AraC |
| TC | HRGMv2_3081_9 | HRGMv2_3081_9_70 | 74074 | 75741 | - | 2.A.25.1.9 |
| TF | HRGMv2_3081_9 | HRGMv2_3081_9_71 | 75950 | 76654 | + | Trans_reg_C |
| TC | HRGMv2_3081_9 | HRGMv2_3081_9_72 | 76835 | 78010 | + | 2.A.36.2.1 |
Gene ID: HRGMv2_3081_9_68
Type: CAZyme
Location: 71104 - 73005 (-)
Type: CAZyme
Location: 71104 - 73005 (-)
Gene ID: HRGMv2_3081_9_69
Type: TF
Location: 73094 - 73894 (+)
Type: TF
Location: 73094 - 73894 (+)
Gene ID: HRGMv2_3081_9_70
Type: TC
Location: 74074 - 75741 (-)
Type: TC
Location: 74074 - 75741 (-)
Gene ID: HRGMv2_3081_9_71
Type: TF
Location: 75950 - 76654 (+)
Type: TF
Location: 75950 - 76654 (+)
Gene ID: HRGMv2_3081_9_72
Type: TC
Location: 76835 - 78010 (+)
Type: TC
Location: 76835 - 78010 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp900768125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.