Cluster: HRGMv2_3081_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3081
- CGC Family ID: CGCFAM_09405
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3081_76 | HRGMv2_3081_76_2 | 778 | 2571 | - | 3.A.1.111.2 |
| TC | HRGMv2_3081_76 | HRGMv2_3081_76_3 | 2564 | 4462 | - | 3.A.1.111.2 |
| pfam | HRGMv2_3081_76 | HRGMv2_3081_76_4 | 4613 | 5791 | - | Eno-Rase_FAD_bd | Enoyl_reductase | Eno-Rase_NADH_b |
| pfam | HRGMv2_3081_76 | HRGMv2_3081_76_5 | 5932 | 6462 | - | Hydrolase | NIF | HAD_2 |
| CAZyme | HRGMv2_3081_76 | HRGMv2_3081_76_6 | 6509 | 7726 | - | GH3 |
Gene ID: HRGMv2_3081_76_2
Type: TC
Location: 778 - 2571 (-)
Type: TC
Location: 778 - 2571 (-)
Gene ID: HRGMv2_3081_76_3
Type: TC
Location: 2564 - 4462 (-)
Type: TC
Location: 2564 - 4462 (-)
Gene ID: HRGMv2_3081_76_4
Type: pfam
Location: 4613 - 5791 (-)
Type: pfam
Location: 4613 - 5791 (-)
Gene ID: HRGMv2_3081_76_5
Type: pfam
Location: 5932 - 6462 (-)
Type: pfam
Location: 5932 - 6462 (-)
Gene ID: HRGMv2_3081_76_6
Type: CAZyme
Location: 6509 - 7726 (-)
Type: CAZyme
Location: 6509 - 7726 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp900768125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.