Cluster: HRGMv2_3081_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3081
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3081_67 | HRGMv2_3081_67_1 | 221 | 1228 | - | GH130_2 |
| pfam | HRGMv2_3081_67 | HRGMv2_3081_67_2 | 1407 | 2030 | - | TMP-TENI |
| pfam | HRGMv2_3081_67 | HRGMv2_3081_67_3 | 2020 | 2820 | - | HK |
| TC | HRGMv2_3081_67 | HRGMv2_3081_67_4 | 2831 | 3343 | - | 3.A.1.26.5 |
Gene ID: HRGMv2_3081_67_1
Type: CAZyme
Location: 221 - 1228 (-)
Type: CAZyme
Location: 221 - 1228 (-)
Gene ID: HRGMv2_3081_67_2
Type: pfam
Location: 1407 - 2030 (-)
Type: pfam
Location: 1407 - 2030 (-)
Gene ID: HRGMv2_3081_67_3
Type: pfam
Location: 2020 - 2820 (-)
Type: pfam
Location: 2020 - 2820 (-)
Gene ID: HRGMv2_3081_67_4
Type: TC
Location: 2831 - 3343 (-)
Type: TC
Location: 2831 - 3343 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp900768125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.